Source: ncbi-vdb
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>,
           Aaron M. Ucko <ucko@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
               d-shlibs (>= 0.104),
               cmake,
               libbz2-dev,
               libxml2-dev,
               libhdf5-dev,
               libmagic-dev,
               libngs-sdk-dev,
               libngs-java,
               libmbedtls-dev,
               zlib1g-dev,
               libzstd-dev,
               default-jdk-headless
Standards-Version: 4.6.1
Vcs-Browser: https://salsa.debian.org/med-team/ncbi-vdb
Vcs-Git: https://salsa.debian.org/med-team/ncbi-vdb.git
Homepage: https://github.com/ncbi/ncbi-vdb
Rules-Requires-Root: no

Package: libncbi-vdb2
Architecture: amd64 arm64 i386 x32
Section: libs
Depends: ${shlibs:Depends},
         ${misc:Depends},
	 ncbi-vdb-data (>= ${source:Version})
Breaks: sra-toolkit (<< 2.11~)
Multi-Arch: same
Description: libraries for using data in the INSDC Sequence Read Archives
 The (US) National Center for Biotechnology Information (NCBI)'s
 Virtual/Vertical Database (VDB) is a highly compressed column-oriented
 data warehousing technology developed initially to address the needs
 of the Sequence Read Archive (SRA). It is unique in that it builds
 databases from smaller parts that can function independently as
 _documents_, supports effective and efficient compression, supports
 encryption while remaining encrypted on disk, transparent distribution
 and remote access.
 .
 This package contains a runtime library for reading VDB data.

Package: libncbi-vdb-dev
Architecture: amd64 arm64 i386 x32
Section: libdevel
Depends: ${shlibs:Depends},
         ${misc:Depends},
         libncbi-vdb2 (= ${binary:Version}),
         libkdf5-dev (= ${binary:Version}),
         libncbi-wvdb-dev (= ${binary:Version}),
         libaec-dev,
         libbz2-dev,
         libzstd-dev,
         zlib1g-dev
Multi-Arch: same
Description: libraries for using data in the INSDC Sequence Read Archives (devel)
 The (US) National Center for Biotechnology Information (NCBI)'s
 Virtual/Vertical Database (VDB) is a highly compressed column-oriented
 data warehousing technology developed initially to address the needs
 of the Sequence Read Archive (SRA). It is unique in that it builds
 databases from smaller parts that can function independently as
 _documents_, supports effective and efficient compression, supports
 encryption while remaining encrypted on disk, transparent distribution
 and remote access.
 .
 This is the development package for reading VDB data.

Package: ncbi-vdb-data
Architecture: all
Section: libs
Depends: ${misc:Depends}
Breaks: libncbi-vdb2 (<< 2.11.2+dfsg-5~), libncbi-vdb3 (<< 3.0.0+dfsg2)
Replaces: libncbi-vdb2 (<< 2.11.2+dfsg-5~), libncbi-vdb3 (<< 3.0.0+dfsg2)
Multi-Arch: foreign
Description: schemata and defaults for the INSDC Sequence Read Archives
 The (US) National Center for Biotechnology Information (NCBI)'s
 Virtual/Vertical Database (VDB) is a highly compressed column-oriented
 data warehousing technology developed initially to address the needs
 of the Sequence Read Archive (SRA). It is unique in that it builds
 databases from smaller parts that can function independently as
 _documents_, supports effective and efficient compression, supports
 encryption while remaining encrypted on disk, transparent distribution
 and remote access.
 .
 This package contains VDB schemata for SRA data and default
 configuration files for VDB libraries.

Package: libkdf5-2
Architecture: amd64 arm64 i386 x32
Section: libs
Depends: ${shlibs:Depends},
         ${misc:Depends},
         libmbedtls-dev
Multi-Arch: same
Description: hdf5 access to data in the INSDC Sequence Read Archives
 The (US) National Center for Biotechnology Information (NCBI)'s
 Virtual/Vertical Database (VDB) is a highly compressed column-oriented
 data warehousing technology developed initially to address the needs
 of the Sequence Read Archive (SRA). It is unique in that it builds
 databases from smaller parts that can function independently as
 _documents_, supports effective and efficient compression, supports
 encryption while remaining encrypted on disk, transparent distribution
 and remote access.
 .
 This library is part of the ncbi-vdb package and provides an interface
 to the Hierarchical Data Format, version 5 (HDF5).

Package: libkdf5-dev
Architecture: amd64 arm64 i386 x32
Section: libdevel
Depends: ${shlibs:Depends},
         ${misc:Depends},
         libkdf5-2 (= ${binary:Version})
Multi-Arch: same
Description: hdf5 access to data in the INSDC Sequence Read Archives (devel)
 The (US) National Center for Biotechnology Information (NCBI)'s
 Virtual/Vertical Database (VDB) is a highly compressed column-oriented
 data warehousing technology developed initially to address the needs
 of the Sequence Read Archive (SRA). It is unique in that it builds
 databases from smaller parts that can function independently as
 _documents_, supports effective and efficient compression, supports
 encryption while remaining encrypted on disk, transparent distribution
 and remote access.
 .
 This library is part of the ncbi-vdb package and provides an interface
 to the Hierarchical Data Format 5 (HDF5).
 .
 This is the development package.

Package: libncbi-wvdb2
Architecture: amd64 arm64 i386 x32
Section: libs
Depends: ${shlibs:Depends},
         ${misc:Depends},
	 ncbi-vdb-data (>= ${source:Version})
Multi-Arch: same
Description: virtual layer update module of ncbi-vdb library
 The (US) National Center for Biotechnology Information (NCBI)'s
 Virtual/Vertical Database (VDB) is a highly compressed column-oriented
 data warehousing technology developed initially to address the needs
 of the Sequence Read Archive (SRA). It is unique in that it builds
 databases from smaller parts that can function independently as
 _documents_, supports effective and efficient compression, supports
 encryption while remaining encrypted on disk, transparent distribution
 and remote access.
 .
 This package contains a runtime library for updating VDB data.

Package: libncbi-wvdb-dev
Architecture: amd64 arm64 i386 x32
Section: libdevel
Depends: ${shlibs:Depends},
         ${misc:Depends},
         libncbi-wvdb2 (= ${binary:Version})
Multi-Arch: same
Description: virtual layer update module of ncbi-vdb library (devel)
 The (US) National Center for Biotechnology Information (NCBI)'s
 Virtual/Vertical Database (VDB) is a highly compressed column-oriented
 data warehousing technology developed initially to address the needs
 of the Sequence Read Archive (SRA). It is unique in that it builds
 databases from smaller parts that can function independently as
 _documents_, supports effective and efficient compression, supports
 encryption while remaining encrypted on disk, transparent distribution
 and remote access.
 .
 This package contains development files for updating VDB data.

Package: libvdb-sqlite2
Architecture: amd64 arm64 i386 x32
Section: libs
Depends: ${shlibs:Depends},
         ${misc:Depends}
Multi-Arch: same
Description: SQLite module of ncbi-vdb library
 The (US) National Center for Biotechnology Information (NCBI)'s
 Virtual/Vertical Database (VDB) is a highly compressed column-oriented
 data warehousing technology developed initially to address the needs
 of the Sequence Read Archive (SRA). It is unique in that it builds
 databases from smaller parts that can function independently as
 _documents_, supports effective and efficient compression, supports
 encryption while remaining encrypted on disk, transparent distribution
 and remote access.
 .
 This library is part of the ncbi-vdb package and provides an SQLite
 interface.

Package: libvdb-sqlite-dev
Architecture: amd64 arm64 i386 x32
Section: libdevel
Depends: ${shlibs:Depends},
         ${misc:Depends},
         libvdb-sqlite2 (= ${binary:Version})
Multi-Arch: same
Description: SQLite module of ncbi-vdb library (devel)
 The (US) National Center for Biotechnology Information (NCBI)'s
 Virtual/Vertical Database (VDB) is a highly compressed column-oriented
 data warehousing technology developed initially to address the needs
 of the Sequence Read Archive (SRA). It is unique in that it builds
 databases from smaller parts that can function independently as
 _documents_, supports effective and efficient compression, supports
 encryption while remaining encrypted on disk, transparent distribution
 and remote access.
 .
 This package contains development files for an SQLite interface.
