Metadata-Version: 2.1
Name: nabu
Version: 2024.1.9
Summary: Nabu - Tomography software
Author-email: Pierre Paleo <pierre.paleo@esrf.fr>, Henri Payno <henri.payno@esrf.fr>, Alessandro Mirone <mirone@esrf.fr>, Jérôme Lesaint <jerome.lesaint@esrf.fr>
Maintainer-email: Pierre Paleo <pierre.paleo@esrf.fr>
License: MIT License
        
        Copyright (c) 2020-2024 ESRF
        
        Permission is hereby granted, free of charge, to any person obtaining a copy
        of this software and associated documentation files (the "Software"), to deal
        in the Software without restriction, including without limitation the rights
        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
        copies of the Software, and to permit persons to whom the Software is
        furnished to do so, subject to the following conditions:
        
        The above copyright notice and this permission notice shall be included in all
        copies or substantial portions of the Software.
        
        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
        SOFTWARE.
        
Project-URL: Homepage, https://gitlab.esrf.fr/tomotools/nabu
Project-URL: Documentation, http://www.silx.org/pub/nabu/doc
Project-URL: Repository, https://gitlab.esrf.fr/tomotools/nabu/-/releases
Project-URL: Changelog, https://gitlab.esrf.fr/tomotools/nabu/-/blob/master/CHANGELOG.md
Keywords: tomography,reconstruction,X-ray imaging,synchrotron radiation,High Performance Computing,Parallel geometry,Conebeam geometry,Helical geometry,Ring artefact correction,Geometric calibration
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: Programming Language :: Python :: 3
Classifier: Programming Language :: Python :: 3.7
Classifier: Programming Language :: Python :: 3.8
Classifier: Programming Language :: Python :: 3.9
Classifier: Programming Language :: Python :: 3.10
Classifier: Environment :: Console
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: Unix
Classifier: Operating System :: MacOS :: MacOS X
Classifier: Operating System :: POSIX
Classifier: Topic :: Scientific/Engineering :: Physics
Classifier: Topic :: Scientific/Engineering :: Medical Science Apps.
Requires-Python: >=3.7
Description-Content-Type: text/markdown
Provides-Extra: full
Provides-Extra: doc
License-File: LICENSE

# Nabu

ESRF tomography processing software.

## Installation

To install the development version:

```bash
pip install [--user] git+https://gitlab.esrf.fr/tomotools/nabu.git
```
To install the stable version:

```bash
pip install [--user] nabu
```

## Usage

Nabu can be used in several ways:
  - As a Python library, by features like `Backprojector`, `FlatField`, etc
  - As a standalone application with the command line interface
  - From Tomwer ([https://gitlab.esrf.fr/tomotools/tomwer/](https://gitlab.esrf.fr/tomotools/tomwer/))

To get quickly started, launch:
```bash
nabu-config 
```
Edit the generated configuration file (`nabu.conf`). Then:

```bash
nabu nabu.conf --slice 500-600
```

will reconstruct the slices 500 to 600, with processing steps depending on `nabu.conf` contents.

## Documentation

The documentation can be found on the silx.org page ([https://www.silx.org/pub/nabu/doc](http://www.silx.org/pub/nabu/doc)).

The latest documentation built by continuous integration can be found here: [https://tomotools.gitlab-pages.esrf.fr/nabu/](https://tomotools.gitlab-pages.esrf.fr/nabu/)

## Running the tests

Once nabu is installed, running

```bash
nabu-test
```
will execute all the tests. You can also specify specific module(s) to test, for example:
```bash
nabu-test preproc misc
```
You can also provide more `pytest` options, for example increase verbosity with `-v`, exit at the first fail with `-x`, etc. Use `nabu-test --help` for displaying the complete options list.



## Nabu - what's in a name ?

Nabu was the Mesopotamian god of literacy, rational arts, scribes and wisdom.
